9–11 Oct 2023
Mercure Hotel MOA Berlin
Europe/Berlin timezone

Occurrence of multidrug-resistant high-risk clonal Escherichia coli lineages in the Baltic Sea with simultaneous low antimicrobial selection pressures

9 Oct 2023, 21:00
1h
Atrium

Atrium

Poster presentation Antimicrobial Use & Resistance Get-Together & Poster Viewing (P1)

Speaker

Phillip Lübcke

Description

Antimicrobial resistant (AMR) E. coli (EC) increasingly occurs in human medical, veterinary, and environmental settings. The World Health Organization categorized extended-spectrum β-lactamase (ESBL)-producing Enterobacterales among the top-priority pathogens for prospective antibiotic (AB) development. It has been shown that not only AB residues but also heavy metals/metalloids (HM) facilitate the spread of AMR bacteria across different locations, which poses a serious health risk for humans and animals in the One Health context. Here, we investigated correlations on the occurrence of ESBL-EC and AB/HM residues in the Baltic Sea in Western Pomerania. We examined 30 ESBL-EC from water samples collected over a period of one year. By combining whole-genome sequencing (WGS) with functional tests and UPLC-MS residue analysis, we characterized the isolates in detail and quantified selection pressures in water samples. Phenotypic data revealed resistances to some important ABs beyond ESBL resistance, such as ciprofloxacin and gentamicin while WGS suggested the presence of the high-risk clonal EC lineages of sequence types (ST)131, ST117, and ST58. We also detected genotypic AB and HM resistance genes, such as to aminoglycosides, arsenic, and mercury. While residue analysis is still ongoing, first results indicate overall low residue levels. Our findings highlight the importance of the Baltic Sea area as a hotspot for AMR bacteria even in the absence of high selection pressures.

Keywords

Antibiotic Resistance; Antibiotic residue analysis; Baltic Sea region; One Health

Junior Scientist Status Yes, I am a Junior Scientist.
Professional Status of the Speaker Graduate Student
Registration-ID code ZOO23-517

Primary author

Phillip Lübcke

Co-authors

Dr Timo Homeier-Bachmann (Institute of Epidemiology, Friedrich Loeffler-Institut, Greifswald-Insel Riems, Germany) Prof. Karsten Becker (Friedrich Loeffler-Institute of Medical Microbiology, University Medicine Greifswald, Greifswald, Germany) Dr Jürgen Bohnert (Friedrich Loeffler-Institute of Medical Microbiology, University Medicine Greifswald, Greifswald, Germany) Dr Christian Schulze (Pharmaceutical Biology, Institute of Pharmacy, University of Greifswald, Greifswald, Germany) Mr Elias Eger (Institute of Infection Medicine, Christian-Albrecht University Kiel, and University Medical Center; Helmholtz Institute for One Health, Greifswald, Germany) Mr Stefan Heiden (Pharmaceutical Microbiology, Institute of Pharmacy, University of Greifswald, Greifswald, Germany) Mr Michael Schwabe (Pharmaceutical Microbiology, Institute of Pharmacy, University of Greifswald, Greifswald, Germany) Prof. Sebastian Günther (Pharmaceutical Biology, Institute of Pharmacy, University of Greifswald, Greifswald, Germany) Prof. Katharina Schaufler (Pharmaceutical Microbiology, Institute of Pharmacy, University of Greifswald, Greifswald, Germany; Institute of Infection Medicine, Christian-Albrecht University Kiel, and University Medical Center Schleswig-Holstein, Kiel, Germany; Helmholtz Institute for One Health, Greifswald, Germany)

Presentation materials

There are no materials yet.

External references

Peer reviewing

Paper